Cpa|evm.model.tig00001264.28

Description : Protein biosynthesis.translation initiation.mRNA loading.PABP mRNA poly-A-tail binding factor

Gene families : OG0000771 (Archaeplastida) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001264.28
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AT1G22760	PAB3	poly(A) binding protein 3	0.02	Archaeplastida
AT1G49760	PAB8, PABP8	poly(A) binding protein 8	0.01	Archaeplastida
AT2G23350	PABP4, PAB4	poly(A) binding protein 4	0.02	Archaeplastida
Cre01.g039300	No alias	Protein biosynthesis.translation initiation.mRNA...	0.05	Archaeplastida
Mp7g18970.1	No alias	mRNA poly-A-tail binding factor (PABP)	0.02	Archaeplastida
Pp3c10_4970V3.1	No alias	poly(A) binding protein 2	0.01	Archaeplastida
Pp3c14_4340V3.1	No alias	poly(A) binding protein 8	0.04	Archaeplastida
Pp3c1_21530V3.1	No alias	poly(A) binding protein 4	0.03	Archaeplastida
Solyc12g088720.2.1	No alias	mRNA poly-A-tail binding factor (PABP)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019079	Capsule_synth_CapA	7	271
IPR000504	RRM_dom	386	454
IPR000504	RRM_dom	476	538
IPR000504	RRM_dom	567	610
IPR000504	RRM_dom	310	367
IPR002004	PABP_HYD	798	844

External Links

No external refs found!