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  5. Cpa|evm.model.tig00001278.11

Cpa|evm.model.tig00001278.11


Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM8-TRM82 tRNA guanosine-methyltransferase complex.TRM82 component


Gene families : OG0004889 (Archaeplastida) Phylogenetic Tree(s): OG0004889_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001278.11
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre08.g374800 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 Archaeplastida
Gb_28259 No alias component TRM82 of TRM8-TRM82 tRNA... 0.03 Archaeplastida
LOC_Os03g53530.1 No alias component TRM82 of TRM8-TRM82 tRNA... 0.05 Archaeplastida
Solyc06g008700.3.1 No alias component TRM82 of TRM8-TRM82 tRNA... 0.07 Archaeplastida
Zm00001e012049_P001 No alias component TRM82 of TRM8-TRM82 tRNA... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 140 172
IPR001680 WD40_repeat 57 88
No external refs found!