AT1G76410 (ATL8)

Aliases : ATL8

Description : RING/U-box superfamily protein

Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0002315 (SeedPlants) Phylogenetic Tree(s): OG_06_0002315_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G76410
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00200880	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.02	Archaeplastida
AMTR_s00056p00122930	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
AT1G22500	No alias	RING/U-box superfamily protein	0.06	Archaeplastida
AT3G18773	No alias	RING/U-box superfamily protein	0.06	Archaeplastida
AT3G60220	ATL4, TL4	TOXICOS EN LEVADURA 4	0.06	Archaeplastida
GSVIVT01022306001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
Gb_14762	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
LOC_Os01g60730.2	No alias	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os02g15100.1	No alias	RING-H2 finger protein ATL40 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os02g15110.1	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
LOC_Os02g33720.1	No alias	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os04g49550.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
LOC_Os04g49700.1	No alias	E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os05g40020.1	No alias	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os06g45580.1	No alias	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os08g38460.1	No alias	ubiquitin protein ligase (XERICO)	0.02	Archaeplastida
LOC_Os10g39936.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_10244600g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10431161g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_377006g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_904294g0010	No alias	RING-H2-class E3 ligase	0.02	Archaeplastida
Mp4g20140.1	No alias	E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis...	0.01	Archaeplastida
Pp3c24_7770V3.1	No alias	hypoxia-responsive family protein / zinc finger...	0.03	Archaeplastida
Smo412606	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.05	Archaeplastida
Smo412609	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	Archaeplastida
Smo441685	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
Solyc01g081040.4.1	No alias	RING-H2-class E3 ligase	0.03	Archaeplastida
Solyc01g088450.2.1	No alias	no hits & (original description: none)	0.1	Archaeplastida
Solyc02g068415.1.1	No alias	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Solyc03g032060.1.1	No alias	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana...	0.08	Archaeplastida
Solyc03g114090.1.1	No alias	RING-H2-class E3 ligase	0.05	Archaeplastida
Solyc11g005310.1.1	No alias	RING-H2-class E3 ligase	0.07	Archaeplastida
Zm00001e003426_P001	No alias	ubiquitin protein ligase (XERICO)	0.03	Archaeplastida
Zm00001e010029_P001	No alias	ubiquitin protein ligase (XERICO)	0.05	Archaeplastida
Zm00001e010787_P001	No alias	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana...	0.08	Archaeplastida
Zm00001e013412_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e017960_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e030930_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e041385_P001	No alias	RING-H2-class E3 ligase	0.04	Archaeplastida
Zm00001e041409_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009746	response to hexose	None	Extended
BP	GO:0009750	response to fructose	RCA	Interproscan
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0005372	water transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006833	water transport	IEP	Neighborhood
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEP	Neighborhood
BP	GO:0009266	response to temperature stimulus	IEP	Neighborhood
BP	GO:0010109	regulation of photosynthesis	IEP	Neighborhood
BP	GO:0010110	regulation of photosynthesis, dark reaction	IEP	Neighborhood
MF	GO:0015250	water channel activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
BP	GO:0016052	carbohydrate catabolic process	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
BP	GO:0034059	response to anoxia	IEP	Neighborhood
BP	GO:0034605	cellular response to heat	IEP	Neighborhood
BP	GO:0036293	response to decreased oxygen levels	IEP	Neighborhood
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	Neighborhood
BP	GO:0042044	fluid transport	IEP	Neighborhood
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0045493	xylan catabolic process	IEP	Neighborhood
BP	GO:0045912	negative regulation of carbohydrate metabolic process	IEP	Neighborhood
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Neighborhood
BP	GO:0070482	response to oxygen levels	IEP	Neighborhood
BP	GO:0071453	cellular response to oxygen levels	IEP	Neighborhood
BP	GO:0071454	cellular response to anoxia	IEP	Neighborhood
BP	GO:0080152	regulation of reductive pentose-phosphate cycle	IEP	Neighborhood
BP	GO:0080153	negative regulation of reductive pentose-phosphate cycle	IEP	Neighborhood
MF	GO:0097599	xylanase activity	IEP	Neighborhood
BP	GO:1905156	negative regulation of photosynthesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	103	146

External Links

No external refs found!

AT1G76410 (ATL8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation