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  5. Cpa|evm.model.tig00001299.2

Cpa|evm.model.tig00001299.2


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS27 component


Gene families : OG0001943 (Archaeplastida) Phylogenetic Tree(s): OG0001943_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001299.2
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00194290 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
AT2G45710 No alias Zinc-binding ribosomal protein family protein 0.05 Archaeplastida
AT3G61110 ARS27A, RS27A ribosomal protein S27 0.14 Archaeplastida
AT5G47930 No alias Zinc-binding ribosomal protein family protein 0.1 Archaeplastida
Cre12.g529400 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01001113001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01032964001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
LOC_Os02g27769.1 No alias component RPS27 of SSU proteome 0.02 Archaeplastida
LOC_Os04g32710.1 No alias component RPS27 of SSU proteome 0.02 Archaeplastida
MA_54625g0010 No alias component RPS27 of SSU proteome 0.06 Archaeplastida
MA_87055g0010 No alias component RPS27 of SSU proteome 0.03 Archaeplastida
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.15 Archaeplastida
Pp3c1_15840V3.1 No alias ribosomal protein S27 0.12 Archaeplastida
Pp3c21_21540V3.1 No alias ribosomal protein S27 0.02 Archaeplastida
Pp3c22_18310V3.1 No alias ribosomal protein S27 0.08 Archaeplastida
Pp3c2_20540V3.1 No alias ribosomal protein S27 0.08 Archaeplastida
Smo163947 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Solyc01g008080.3.1 No alias component RPS27 of SSU proteome 0.08 Archaeplastida
Zm00001e012048_P001 No alias component RPS27 of SSU proteome 0.07 Archaeplastida
Zm00001e024704_P001 No alias component RPS27 of SSU proteome 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 30 84
No external refs found!