Cpa|evm.model.tig00001339.5

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component

Gene families : OG0004085 (Archaeplastida) Phylogenetic Tree(s): OG0004085_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00001339.5
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00055p00220020	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.20S core...	0.01	Archaeplastida
AT3G60820	PBF1	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.07	Archaeplastida
Cre26.g756797	No alias	Protein degradation.26S proteasome.20S core...	0.15	Archaeplastida
GSVIVT01000943001	No alias	Protein degradation.26S proteasome.20S core...	0.01	Archaeplastida
GSVIVT01027613001	No alias	Protein degradation.26S proteasome.20S core...	0.05	Archaeplastida
LOC_Os09g32800.1	No alias	component beta type-6 of 26S proteasome	0.09	Archaeplastida
Mp1g12450.1	No alias	component beta type-6 of 26S proteasome	0.09	Archaeplastida
Pp3c16_16960V3.1	No alias	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.02	Archaeplastida
Pp3c27_2640V3.1	No alias	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.02	Archaeplastida
Smo124882	No alias	Protein degradation.26S proteasome.20S core...	0.05	Archaeplastida
Smo94273	No alias	Protein degradation.26S proteasome.20S core...	0.04	Archaeplastida
Solyc02g084920.3.1	No alias	component beta type-6 of 26S proteasome	0.04	Archaeplastida
Zm00001e010121_P001	No alias	component beta type-6 of 26S proteasome	0.05	Archaeplastida
Zm00001e034624_P005	No alias	component beta type-6 of 26S proteasome	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	8	199

External Links

No external refs found!