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  5. Cpa|evm.model.tig00001368.15

Cpa|evm.model.tig00001368.15


Description : ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002087 (Archaeplastida) Phylogenetic Tree(s): OG0002087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001368.15
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00199450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT1G54350 No alias ABC transporter family protein 0.02 Archaeplastida
Cre10.g439000 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01036685001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
LOC_Os01g11946.1 No alias subfamily ABCD transporter 0.04 Archaeplastida
Mp2g18020.1 No alias subfamily ABCD transporter 0.04 Archaeplastida
Pp3c5_21800V3.1 No alias ABC transporter family protein 0.01 Archaeplastida
Pp3c6_11470V3.1 No alias ABC transporter family protein 0.02 Archaeplastida
Zm00001e026058_P001 No alias subfamily ABCD transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 443 600
IPR011527 ABC1_TM_dom 172 222
No external refs found!