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  5. Cpa|evm.model.tig00001376.20

Cpa|evm.model.tig00001376.20


Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component


Gene families : OG0002910 (Archaeplastida) Phylogenetic Tree(s): OG0002910_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001376.20
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Cre17.g719000 No alias RNA processing.messenger ribonucleoprotein particle... 0.04 Archaeplastida
Gb_14863 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.01 Archaeplastida
LOC_Os01g36890.2 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.01 Archaeplastida
LOC_Os01g36920.2 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.02 Archaeplastida
MA_99733g0010 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.02 Archaeplastida
Mp1g02350.1 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.02 Archaeplastida
Pp3c11_18810V3.1 No alias DEAD/DEAH box RNA helicase family protein 0.02 Archaeplastida
Zm00001e026684_P001 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.02 Archaeplastida
Zm00001e027715_P001 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 1 145
IPR001650 Helicase_C 185 292
No external refs found!