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  5. Cpa|evm.model.tig00001408.15

Cpa|evm.model.tig00001408.15


Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component


Gene families : OG0001193 (Archaeplastida) Phylogenetic Tree(s): OG0001193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001408.15
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00163370 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
AMTR_s00048p00165750 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
AT1G05520 No alias Sec23/Sec24 protein transport family protein 0.05 Archaeplastida
AT3G23660 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
Cre03.g180850 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
GSVIVT01018103001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
GSVIVT01026719001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
GSVIVT01031567001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
Gb_05558 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
LOC_Os03g53140.2 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
LOC_Os08g36994.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
LOC_Os11g24560.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida
MA_10427000g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp7g12190.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 Archaeplastida
Pp3c10_18520V3.1 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
Pp3c6_940V3.1 No alias Sec23/Sec24 protein transport family protein 0.03 Archaeplastida
Smo107900 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
Smo168140 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
Solyc01g081070.3.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.01 Archaeplastida
Solyc03g005380.3.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.01 Archaeplastida
Zm00001e008888_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 Archaeplastida
Zm00001e009959_P002 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 Archaeplastida
Zm00001e012060_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.01 Archaeplastida
Zm00001e021415_P001 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006895 Znf_Sec23_Sec24 164 203
IPR012990 Sec23_24_beta_S 508 609
IPR006900 Sec23/24_helical_dom 622 700
No external refs found!