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  5. Cpa|evm.model.tig00001424.5

Cpa|evm.model.tig00001424.5


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL10 component


Gene families : OG0002582 (Archaeplastida) Phylogenetic Tree(s): OG0002582_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001424.5
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00080890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
AMTR_s00077p00151750 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
AT1G14320 SAC52, RPL10, RPL10A Ribosomal protein L16p/L10e family protein 0.24 Archaeplastida
AT1G26910 RPL10B Ribosomal protein L16p/L10e family protein 0.05 Archaeplastida
AT1G66580 RPL10C, SAG24 senescence associated gene 24 0.02 Archaeplastida
GSVIVT01001137001 No alias 60S ribosomal protein L10 OS=Vitis riparia 0.17 Archaeplastida
GSVIVT01024537001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Gb_06067 No alias component RPL10 of LSU proteome component 0.09 Archaeplastida
LOC_Os11g11390.1 No alias component RPL10 of LSU proteome component 0.07 Archaeplastida
MA_17326g0010 No alias component RPL10 of LSU proteome component 0.16 Archaeplastida
Mp4g23990.1 No alias component RPL10 of LSU proteome component 0.27 Archaeplastida
Pp3c11_4130V3.1 No alias Ribosomal protein L16p/L10e family protein 0.21 Archaeplastida
Pp3c1_3170V3.1 No alias Ribosomal protein L16p/L10e family protein 0.2 Archaeplastida
Pp3c2_29600V3.1 No alias Ribosomal protein L16p/L10e family protein 0.25 Archaeplastida
Pp3c7_22400V3.1 No alias Ribosomal protein L16p/L10e family protein 0.2 Archaeplastida
Smo437527 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Solyc06g007520.4.1 No alias component RPL10 of LSU proteome component 0.22 Archaeplastida
Solyc06g082650.4.1 No alias component RPL10 of LSU proteome component 0.23 Archaeplastida
Solyc06g082670.3.1 No alias component RPL10 of LSU proteome component 0.25 Archaeplastida
Zm00001e004933_P001 No alias component RPL10 of LSU proteome component 0.12 Archaeplastida
Zm00001e012474_P002 No alias component RPL10 of LSU proteome component 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 29 139
No external refs found!