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  5. Cpa|evm.model.tig00001428.4

Cpa|evm.model.tig00001428.4


Description : RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component


Gene families : OG0001366 (Archaeplastida) Phylogenetic Tree(s): OG0001366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001428.4
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00218290 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase III-dependent... 0.02 Archaeplastida
AMTR_s00029p00113670 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase III-dependent... 0.04 Archaeplastida
GSVIVT01016771001 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.06 Archaeplastida
Gb_30476 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.04 Archaeplastida
Gb_37449 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_37451 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.01 Archaeplastida
LOC_Os02g42200.1 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.01 Archaeplastida
MA_10110373g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_59941g0010 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.02 Archaeplastida
MA_60759g0010 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.05 Archaeplastida
Mp1g26830.1 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.02 Archaeplastida
Pp3c4_16500V3.1 No alias B-block binding subunit of TFIIIC 0.03 Archaeplastida
Smo409587 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.04 Archaeplastida
Smo420531 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.01 Archaeplastida
Solyc09g009800.3.1 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.05 Archaeplastida
Zm00001e015829_P001 No alias promotor-binding component TFC3 of TFIIIc transcription... 0.02 Archaeplastida
Zm00001e015839_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007309 TFIIIC_Bblock-bd 172 230
No external refs found!