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  5. Cpa|evm.model.tig00001486.9

Cpa|evm.model.tig00001486.9


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS26 component


Gene families : OG0002687 (Archaeplastida) Phylogenetic Tree(s): OG0002687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00001486.9
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00042770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
AT2G40510 No alias Ribosomal protein S26e family protein 0.16 Archaeplastida
AT2G40590 No alias Ribosomal protein S26e family protein 0.1 Archaeplastida
AT3G56340 No alias Ribosomal protein S26e family protein 0.26 Archaeplastida
Cre16.g682300 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
GSVIVT01024576001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
GSVIVT01032696001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
Gb_00995 No alias component RPS26 of SSU proteome 0.07 Archaeplastida
Gb_00996 No alias component RPS26 of SSU proteome 0.04 Archaeplastida
LOC_Os01g60790.1 No alias component RPS26 of SSU proteome 0.11 Archaeplastida
LOC_Os05g39960.1 No alias component RPS26 of SSU proteome 0.15 Archaeplastida
MA_114136g0010 No alias component RPS26 of SSU proteome 0.04 Archaeplastida
MA_74546g0010 No alias component RPS26 of SSU proteome 0.02 Archaeplastida
Mp2g06210.1 No alias component RPS26 of SSU proteome 0.06 Archaeplastida
Pp3c16_9210V3.1 No alias Ribosomal protein S26e family protein 0.12 Archaeplastida
Pp3c5_16070V3.1 No alias Ribosomal protein S26e family protein 0.1 Archaeplastida
Pp3c6_8910V3.1 No alias Ribosomal protein S26e family protein 0.15 Archaeplastida
Smo77589 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
Solyc04g008810.3.1 No alias component RPS26 of SSU proteome 0.2 Archaeplastida
Solyc06g007470.3.1 No alias component RPS26 of SSU proteome 0.03 Archaeplastida
Zm00001e011780_P001 No alias component RPS26 of SSU proteome 0.14 Archaeplastida
Zm00001e027298_P001 No alias component RPS26 of SSU proteome 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 35 140
No external refs found!