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  5. Cpa|evm.model.tig00020510.131

Cpa|evm.model.tig00020510.131


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000908 (Archaeplastida) Phylogenetic Tree(s): OG0000908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020510.131
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031354001 No alias External stimuli response.light.red/far red light.PHY... 0.01 Archaeplastida
MA_10435530g0010 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.01 Archaeplastida
Zm00001e005702_P001 No alias phytochrome photoreceptor (PHY) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013515 Phytochrome_cen-reg 594 658
IPR013654 PAS_2 212 319
IPR011598 bHLH_dom 96 147
IPR013767 PAS_fold 695 755
IPR003018 GAF 347 474
No external refs found!