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  5. Cpa|evm.model.tig00020553.153

Cpa|evm.model.tig00020553.153


Description : Lipid metabolism.sphingolipid metabolism.serine C-palmitoyltransferase complex.catalytic subunit 1


Gene families : OG0003481 (Archaeplastida) Phylogenetic Tree(s): OG0003481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020553.153
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00017970 evm_27.TU.AmTr_v1... Lipid metabolism.sphingolipid metabolism.serine... 0.04 Archaeplastida
AT4G36480 ATLCB1, FBR11,... long-chain base1 0.02 Archaeplastida
LOC_Os03g14800.1 No alias catalytic subunit 1 of serine C-palmitoyltransferase complex 0.02 Archaeplastida
Smo230105 No alias Lipid metabolism.sphingolipid metabolism.serine... 0.03 Archaeplastida
Solyc11g019950.2.1 No alias catalytic subunit 1 of serine C-palmitoyltransferase complex 0.01 Archaeplastida
Zm00001e034058_P001 No alias Long chain base biosynthesis protein 1b OS=Oryza sativa... 0.01 Archaeplastida
Zm00001e038566_P001 No alias catalytic subunit 1 of serine C-palmitoyltransferase complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 107 301
No external refs found!