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  5. Cpa|evm.model.tig00020553.156

Cpa|evm.model.tig00020553.156


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit


Gene families : OG0003156 (Archaeplastida) Phylogenetic Tree(s): OG0003156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020553.156
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00238440 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
AT4G31480 No alias Coatomer, beta subunit 0.02 Archaeplastida
AT4G31490 No alias Coatomer, beta subunit 0.03 Archaeplastida
Cre04.g217921 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
GSVIVT01035511001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Gb_03760 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Archaeplastida
Gb_23100 No alias subunit beta of cargo adaptor F-subcomplex 0.02 Archaeplastida
MA_10431517g0010 No alias subunit beta of cargo adaptor F-subcomplex 0.02 Archaeplastida
MA_10432097g0020 No alias subunit beta of cargo adaptor F-subcomplex 0.01 Archaeplastida
Mp5g08450.1 No alias subunit beta of cargo adaptor F-subcomplex 0.03 Archaeplastida
Pp3c25_10770V3.1 No alias Coatomer, beta subunit 0.03 Archaeplastida
Pp3c6_720V3.1 No alias Coatomer, beta subunit 0.02 Archaeplastida
Pp3c7_8430V3.1 No alias Coatomer, beta subunit 0.03 Archaeplastida
Smo160340 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Solyc01g007150.3.1 No alias subunit beta of cargo adaptor F-subcomplex 0.03 Archaeplastida
Solyc10g081920.2.1 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Archaeplastida
Zm00001e009041_P001 No alias subunit beta of cargo adaptor F-subcomplex 0.02 Archaeplastida
Zm00001e017416_P001 No alias subunit beta of cargo adaptor F-subcomplex 0.05 Archaeplastida
Zm00001e025465_P001 No alias subunit beta of cargo adaptor F-subcomplex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029446 COPB1_appendage_platform_dom 795 884
IPR002553 Clathrin/coatomer_adapt-like_N 17 470
IPR011710 Coatomer_bsu_C 648 788
No external refs found!