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  5. Cpa|evm.model.tig00020553.48

Cpa|evm.model.tig00020553.48


Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-G component


Gene families : OG0001659 (Archaeplastida) Phylogenetic Tree(s): OG0001659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020553.48
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00092540 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 Archaeplastida
AT2G23930 SNRNP-G probable small nuclear ribonucleoprotein G 0.03 Archaeplastida
AT3G11500 No alias Small nuclear ribonucleoprotein family protein 0.05 Archaeplastida
Cre03.g164101 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.08 Archaeplastida
Cre13.g566050 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.08 Archaeplastida
LOC_Os03g29740.1 No alias component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.05 Archaeplastida
LOC_Os07g41790.2 No alias component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.02 Archaeplastida
LOC_Os08g08040.1 No alias component LSm7 of U6-associated LSm accessory... 0.05 Archaeplastida
MA_91807g0010 No alias component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.02 Archaeplastida
Mp4g05710.1 No alias component LSm7 of U6-associated LSm accessory... 0.05 Archaeplastida
Mp4g07410.1 No alias component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
Pp3c21_9740V3.1 No alias Small nuclear ribonucleoprotein family protein 0.07 Archaeplastida
Pp3c5_21480V3.1 No alias probable small nuclear ribonucleoprotein G 0.06 Archaeplastida
Pp3c8_4480V3.1 No alias Small nuclear ribonucleoprotein family protein 0.05 Archaeplastida
Smo227744 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 Archaeplastida
Solyc09g009640.3.1 No alias component LSm7 of U6-associated LSm accessory... 0.01 Archaeplastida
Zm00001e006823_P001 No alias component LSm7 of U6-associated LSm accessory... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 9 71
No external refs found!