Description : RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component
Gene families : OG0002697 (Archaeplastida) Phylogenetic Tree(s): OG0002697_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00020554.138 | |
Cluster | HCCA: Cluster_175 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00180540 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.deadenylation-dependent... | 0.01 | Archaeplastida | |
AT5G59710 | VIP2, AtVIP2 | VIRE2 interacting protein 2 | 0.01 | Archaeplastida | |
Cre06.g309050 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.01 | Archaeplastida | |
LOC_Os02g54120.4 | No alias | component NOT2 of mRNA deadenylation CCR4-NOT complex | 0.01 | Archaeplastida | |
MA_19243g0020 | No alias | component NOT2 of mRNA deadenylation CCR4-NOT complex | 0.01 | Archaeplastida | |
Mp1g21150.1 | No alias | component NOT2 of mRNA deadenylation CCR4-NOT complex | 0.02 | Archaeplastida | |
Pp3c10_21550V3.1 | No alias | NOT2 / NOT3 / NOT5 family | 0.02 | Archaeplastida | |
Zm00001e031975_P003 | No alias | component NOT2 of mRNA deadenylation CCR4-NOT complex | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007282 | NOT | 421 | 515 |
No external refs found! |