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  5. AT1G78730

AT1G78730


Description : FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78730
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT1G66640 No alias RNI-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Neighborhood
BP GO:0000103 sulfate assimilation IEP Neighborhood
BP GO:0000338 protein deneddylation IEP Neighborhood
BP GO:0001934 positive regulation of protein phosphorylation IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004124 cysteine synthase activity IEP Neighborhood
MF GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004676 3-phosphoinositide-dependent protein kinase activity IEP Neighborhood
MF GO:0004686 elongation factor-2 kinase activity IEP Neighborhood
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Neighborhood
MF GO:0004844 uracil DNA N-glycosylase activity IEP Neighborhood
CC GO:0005697 telomerase holoenzyme complex IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP Neighborhood
CC GO:0008180 COP9 signalosome IEP Neighborhood
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP Neighborhood
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Neighborhood
CC GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing) IEP Neighborhood
BP GO:0010387 COP9 signalosome assembly IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
BP GO:0010562 positive regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016783 sulfurtransferase activity IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0031401 positive regulation of protein modification process IEP Neighborhood
CC GO:0031501 mannosyltransferase complex IEP Neighborhood
BP GO:0032206 positive regulation of telomere maintenance IEP Neighborhood
BP GO:0032210 regulation of telomere maintenance via telomerase IEP Neighborhood
BP GO:0032212 positive regulation of telomere maintenance via telomerase IEP Neighborhood
CC GO:0033185 dolichol-phosphate-mannose synthase complex IEP Neighborhood
BP GO:0033674 positive regulation of kinase activity IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
BP GO:0042327 positive regulation of phosphorylation IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0043966 histone H3 acetylation IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
BP GO:0045860 positive regulation of protein kinase activity IEP Neighborhood
BP GO:0045937 positive regulation of phosphate metabolic process IEP Neighborhood
BP GO:0048232 male gamete generation IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051347 positive regulation of transferase activity IEP Neighborhood
BP GO:0060359 response to ammonium ion IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
MF GO:0070300 phosphatidic acid binding IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
MF GO:0097506 deaminated base DNA N-glycosylase activity IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1904356 regulation of telomere maintenance via telomere lengthening IEP Neighborhood
BP GO:1904358 positive regulation of telomere maintenance via telomere lengthening IEP Neighborhood
BP GO:2000278 regulation of DNA biosynthetic process IEP Neighborhood
BP GO:2000573 positive regulation of DNA biosynthetic process IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006566 FBD 347 388
IPR001810 F-box_dom 25 61
IPR013101 Leu-rich_rpt_2 151 176
No external refs found!