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  5. AT1G78760

AT1G78760


Description : F-box/RNI-like superfamily protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78760
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT1G78750 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT4G13985 FBD1 FBD-associated F-box protein 0.03 Archaeplastida
AT5G18770 No alias F-box/FBD-like domains containing protein 0.04 Archaeplastida
AT5G22670 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G22720 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G27750 No alias F-box/FBD-like domains containing protein 0.04 Archaeplastida
AT5G44950 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.03 Archaeplastida
AT5G44980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
MF GO:0004564 beta-fructofuranosidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008515 sucrose transmembrane transporter activity IEP Neighborhood
BP GO:0008643 carbohydrate transport IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
MF GO:0015086 cadmium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015154 disaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015434 cadmium-transporting ATPase activity IEP Neighborhood
BP GO:0015766 disaccharide transport IEP Neighborhood
BP GO:0015770 sucrose transport IEP Neighborhood
BP GO:0015772 oligosaccharide transport IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0035690 cellular response to drug IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0055069 zinc ion homeostasis IEP Neighborhood
BP GO:0071215 cellular response to abscisic acid stimulus IEP Neighborhood
BP GO:0071236 cellular response to antibiotic IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071407 cellular response to organic cyclic compound IEP Neighborhood
BP GO:0071446 cellular response to salicylic acid stimulus IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0097306 cellular response to alcohol IEP Neighborhood
InterPro domains Description Start Stop
IPR006566 FBD 368 411
IPR001810 F-box_dom 17 53
No external refs found!