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  5. Cpa|evm.model.tig00020563.191

Cpa|evm.model.tig00020563.191


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component


Gene families : OG0001282 (Archaeplastida) Phylogenetic Tree(s): OG0001282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020563.191
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00258510 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G02980 ATCUL2, CUL2 cullin 2 0.01 Archaeplastida
Cre17.g734400 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01010966001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os05g05700.1 No alias scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.03 Archaeplastida
MA_17031g0010 No alias no description available(sp|q5zc88|cul1_orysj : 263.0) 0.01 Archaeplastida
Pp3c5_14660V3.1 No alias cullin 1 0.02 Archaeplastida
Smo173394 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Zm00001e027502_P001 No alias scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.04 Archaeplastida
Zm00001e040431_P004 No alias scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001373 Cullin_N 33 511
No external refs found!