AT1G78950

Description : Terpenoid cyclases family protein

Gene families : OG0000614 (Archaeplastida) Phylogenetic Tree(s): OG0000614_tree ,
OG_05_0000358 (LandPlants) Phylogenetic Tree(s): OG_05_0000358_tree ,
OG_06_0000211 (SeedPlants) Phylogenetic Tree(s): OG_06_0000211_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G78950
Cluster	HCCA: Cluster_255

Target	Alias	Description	ECC score	Gene Family Method
AT1G66960	No alias	Terpenoid cyclases family protein	0.06	Archaeplastida
AT1G78955	CAMS1	camelliol C synthase 1	0.04	Archaeplastida
GSVIVT01021473001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.04	Archaeplastida
GSVIVT01021482001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.05	Archaeplastida
GSVIVT01021494001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.03	Archaeplastida
GSVIVT01029474001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.03	Archaeplastida
GSVIVT01029481001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.05	Archaeplastida
GSVIVT01029482001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.04	Archaeplastida
GSVIVT01029488001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.04	Archaeplastida
GSVIVT01029489001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.05	Archaeplastida
GSVIVT01029514001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.03	Archaeplastida
GSVIVT01032217001	No alias	Secondary metabolism.terpenoids.terpenoid...	0.05	Archaeplastida
LOC_Os11g08569.1	No alias	triterpenoid synthase	0.03	Archaeplastida
LOC_Os11g18366.2	No alias	triterpenoid synthase	0.03	Archaeplastida
Pp3c18_20150V3.1	No alias	cycloartenol synthase 1	0.03	Archaeplastida
Smo129950	No alias	Secondary metabolism.terpenoids.terpenoid...	0.03	Archaeplastida
Solyc04g070980.4.1	No alias	triterpenoid synthase. cycloartenol synthase	0.03	Archaeplastida
Solyc05g047580.4.1	No alias	triterpenoid synthase	0.07	Archaeplastida
Solyc12g006505.1.1	No alias	triterpenoid synthase	0.03	Archaeplastida
Solyc12g006520.2.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
Solyc12g006530.2.1	No alias	triterpenoid synthase	0.05	Archaeplastida
Zm00001e040045_P001	No alias	No annotation	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006722	triterpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016104	triterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016866	intramolecular transferase activity	None	Extended
BP	GO:0019742	pentacyclic triterpenoid metabolic process	None	Extended
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	RCA	Interproscan
MF	GO:0031559	oxidosqualene cyclase activity	None	Extended
MF	GO:0042300	beta-amyrin synthase activity	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006723	cuticle hydrocarbon biosynthetic process	IEP	Neighborhood
CC	GO:0008180	COP9 signalosome	IEP	Neighborhood
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Neighborhood
BP	GO:0009269	response to desiccation	IEP	Neighborhood
BP	GO:0009409	response to cold	IEP	Neighborhood
BP	GO:0009411	response to UV	IEP	Neighborhood
BP	GO:0009414	response to water deprivation	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
CC	GO:0009505	plant-type cell wall	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009838	abscission	IEP	Neighborhood
BP	GO:0009914	hormone transport	IEP	Neighborhood
BP	GO:0009926	auxin polar transport	IEP	Neighborhood
BP	GO:0010025	wax biosynthetic process	IEP	Neighborhood
BP	GO:0010166	wax metabolic process	IEP	Neighborhood
BP	GO:0010197	polar nucleus fusion	IEP	Neighborhood
BP	GO:0010227	floral organ abscission	IEP	Neighborhood
BP	GO:0010315	auxin efflux	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010410	hemicellulose metabolic process	IEP	Neighborhood
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Neighborhood
BP	GO:0010540	basipetal auxin transport	IEP	Neighborhood
BP	GO:0010541	acropetal auxin transport	IEP	Neighborhood
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	Neighborhood
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Neighborhood
CC	GO:0019005	SCF ubiquitin ligase complex	IEP	Neighborhood
BP	GO:0019953	sexual reproduction	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
MF	GO:0042299	lupeol synthase activity	IEP	Neighborhood
BP	GO:0042335	cuticle development	IEP	Neighborhood
BP	GO:0043446	cellular alkane metabolic process	IEP	Neighborhood
BP	GO:0043447	alkane biosynthetic process	IEP	Neighborhood
BP	GO:0043473	pigmentation	IEP	Neighborhood
BP	GO:0043476	pigment accumulation	IEP	Neighborhood
BP	GO:0043478	pigment accumulation in response to UV light	IEP	Neighborhood
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0043480	pigment accumulation in tissues	IEP	Neighborhood
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	Neighborhood
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0044703	multi-organism reproductive process	IEP	Neighborhood
BP	GO:0045491	xylan metabolic process	IEP	Neighborhood
BP	GO:0045492	xylan biosynthetic process	IEP	Neighborhood
MF	GO:0047617	acyl-CoA hydrolase activity	IEP	Neighborhood
BP	GO:0048235	pollen sperm cell differentiation	IEP	Neighborhood
MF	GO:0050378	UDP-glucuronate 4-epimerase activity	IEP	Neighborhood
BP	GO:0060918	auxin transport	IEP	Neighborhood
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0071771	aldehyde decarbonylase activity	IEP	Neighborhood
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Neighborhood
MF	GO:0080054	low-affinity nitrate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0080133	midchain alkane hydroxylase activity	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Neighborhood
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032697	SQ_cyclase_N	105	405
IPR032696	SQ_cyclase_C	416	753

External Links

No external refs found!

AT1G78950

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation