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  5. Cpa|evm.model.tig00020572.59

Cpa|evm.model.tig00020572.59


Description : RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component


Gene families : OG0002934 (Archaeplastida) Phylogenetic Tree(s): OG0002934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020572.59
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT1G33980 ATUPF3, UPF3 Smg-4/UPF3 family protein 0.02 Archaeplastida
Zm00001e040916_P004 No alias component UPF3 of RNA quality control Exon Junction complex 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005120 UPF3_dom 18 180
No external refs found!