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  5. Cpa|evm.model.tig00020603.38

Cpa|evm.model.tig00020603.38


Description : RNA biosynthesis.transcriptional activation.TUB transcription factor


Gene families : OG0000335 (Archaeplastida) Phylogenetic Tree(s): OG0000335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020603.38
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.01 Archaeplastida
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
Gb_22686 No alias transcription factor (TUB) 0.01 Archaeplastida
Gb_35372 No alias transcription factor (TUB) 0.01 Archaeplastida
LOC_Os01g64700.2 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.02 Archaeplastida
Zm00001e007472_P001 No alias transcription factor (TUB) 0.01 Archaeplastida
Zm00001e024653_P002 No alias transcription factor (TUB) 0.01 Archaeplastida
Zm00001e037073_P001 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 55 138
IPR000007 Tubby_C 375 457
IPR000007 Tubby_C 272 353
No external refs found!