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  5. Cpa|evm.model.tig00020610.79

Cpa|evm.model.tig00020610.79


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS8 component


Gene families : OG0001661 (Archaeplastida) Phylogenetic Tree(s): OG0001661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020610.79
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00155570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
AMTR_s00109p00031400 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.18 Archaeplastida
AT5G20290 No alias Ribosomal protein S8e family protein 0.31 Archaeplastida
Cre06.g272800 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.29 Archaeplastida
GSVIVT01006249001 No alias 40S ribosomal protein S8 OS=Zea mays 0.04 Archaeplastida
GSVIVT01031566001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01037763001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 Archaeplastida
Gb_28325 No alias component RPS8 of SSU proteome 0.21 Archaeplastida
LOC_Os02g28810.1 No alias 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... 0.26 Archaeplastida
LOC_Os04g28180.1 No alias component RPS8 of SSU proteome 0.14 Archaeplastida
MA_14571g0010 No alias component RPS8 of SSU proteome 0.09 Archaeplastida
MA_4907g0010 No alias 40S ribosomal protein S8 OS=Prunus armeniaca... 0.02 Archaeplastida
MA_9738483g0010 No alias component RPS8 of SSU proteome 0.04 Archaeplastida
Mp2g16300.1 No alias component RPS8 of SSU proteome 0.33 Archaeplastida
Pp3c12_18260V3.1 No alias Ribosomal protein S8e family protein 0.06 Archaeplastida
Pp3c13_20020V3.1 No alias Ribosomal protein S8e family protein 0.36 Archaeplastida
Pp3c19_6490V3.1 No alias Ribosomal protein S8e family protein 0.18 Archaeplastida
Pp3c22_1860V3.1 No alias Ribosomal protein S8e family protein 0.3 Archaeplastida
Pp3c4_11370V3.1 No alias Ribosomal protein S8e family protein 0.12 Archaeplastida
Solyc06g007570.3.1 No alias component RPS8 of SSU proteome 0.16 Archaeplastida
Solyc06g083180.4.1 No alias component RPS8 of SSU proteome 0.28 Archaeplastida
Solyc07g065170.3.1 No alias component RPS8 of SSU proteome 0.1 Archaeplastida
Solyc09g057650.3.1 No alias component RPS8 of SSU proteome 0.12 Archaeplastida
Solyc10g006070.3.1 No alias component RPS8 of SSU proteome 0.09 Archaeplastida
Zm00001e004092_P002 No alias component RPS8 of SSU proteome 0.2 Archaeplastida
Zm00001e024994_P001 No alias component RPS8 of SSU proteome 0.04 Archaeplastida
Zm00001e024995_P001 No alias component RPS8 of SSU proteome 0.32 Archaeplastida
Zm00001e024996_P001 No alias component RPS8 of SSU proteome 0.18 Archaeplastida
Zm00001e024999_P001 No alias component RPS8 of SSU proteome 0.12 Archaeplastida
Zm00001e025000_P003 No alias no hits & (original description: none) 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 1 193
No external refs found!