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  5. Cpa|evm.model.tig00020629.149

Cpa|evm.model.tig00020629.149


No description available


Gene families : OG0002173 (Archaeplastida) Phylogenetic Tree(s): OG0002173_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020629.149
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00265580 evm_27.TU.AmTr_v1... DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s00018p00168540 evm_27.TU.AmTr_v1... DNA mismatch repair protein MSH1, mitochondrial... 0.01 Archaeplastida
GSVIVT01038675001 No alias DNA mismatch repair protein MSH1, mitochondrial... 0.02 Archaeplastida
LOC_Os04g58410.1 No alias DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp2g00480.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp2g11550.1 No alias DNA mismatch repair protein MSH1, mitochondrial... 0.02 Archaeplastida
Pp3c17_13780V3.1 No alias DNA mismatch repair protein MutS, type 2 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002625 Smr_dom 874 944
IPR000432 DNA_mismatch_repair_MutS_C 423 603
No external refs found!