AT1G80110 (ATPP2-B11, PP2-B11)

Aliases : ATPP2-B11, PP2-B11

Description : phloem protein 2-B11

Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000096 (SeedPlants) Phylogenetic Tree(s): OG_06_0000096_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT1G80110
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AT2G02240 MEE66 F-box family protein 0.05 Archaeplastida
AT2G02250 AtPP2-B2, PP2-B2 phloem protein 2-B2 0.03 Archaeplastida
LOC_Os02g56770.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g02550.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
Mp1g08250.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g083730.2.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0030246 carbohydrate binding ISS Interproscan
Type GO Term Name Evidence Source
CC GO:0009524 phragmoplast IEP Neighborhood
BP GO:0009808 lignin metabolic process IEP Neighborhood
BP GO:0009809 lignin biosynthetic process IEP Neighborhood
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 2 44
IPR025886 PP2-like 92 255
No external refs found!