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  5. Cpa|evm.model.tig00020684.6

Cpa|evm.model.tig00020684.6


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020684.6
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000204.87 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Cpa|evm.model.tig00020934.54 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Cre16.g651400 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
LOC_Os02g15020.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os06g34470.1 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_152102g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Smo74753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc04g074790.3.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e015477_P001 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 627 668
IPR000008 C2_dom 958 1070
No external refs found!