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  5. Cpa|evm.model.tig00020703.10

Cpa|evm.model.tig00020703.10


Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component


Gene families : OG0003431 (Archaeplastida) Phylogenetic Tree(s): OG0003431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020703.10
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00242820 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.regulatory... 0.01 Archaeplastida
AT2G20580 RPN1A, ATRPN1A 26S proteasome regulatory subunit S2 1A 0.02 Archaeplastida
AT4G28470 RPN1B, ATRPN1B 26S proteasome regulatory subunit S2 1B 0.02 Archaeplastida
Cre16.g676197 No alias Protein degradation.26S proteasome.regulatory... 0.05 Archaeplastida
GSVIVT01020602001 No alias Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
Gb_05383 No alias regulatory component RPN1 of 26S proteasome 0.03 Archaeplastida
LOC_Os02g05340.1 No alias regulatory component RPN1 of 26S proteasome 0.03 Archaeplastida
LOC_Os09g15750.1 No alias regulatory component RPN1 of 26S proteasome 0.01 Archaeplastida
Mp5g07110.1 No alias regulatory component RPN1 of 26S proteasome 0.03 Archaeplastida
Pp3c19_20260V3.1 No alias 26S proteasome regulatory subunit S2 1A 0.01 Archaeplastida
Smo228162 No alias Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
Solyc07g053650.4.1 No alias regulatory component RPN1 of 26S proteasome 0.02 Archaeplastida
Zm00001e013651_P001 No alias regulatory component RPN1 of 26S proteasome 0.03 Archaeplastida
Zm00001e025223_P001 No alias regulatory component RPN1 of 26S proteasome 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002015 Proteasome/cyclosome_rpt 448 480
No external refs found!