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  5. AT1G07660

AT1G07660


Description : Histone superfamily protein


Gene families : OG0000170 (Archaeplastida) Phylogenetic Tree(s): OG0000170_tree ,
OG_05_0000135 (LandPlants) Phylogenetic Tree(s): OG_05_0000135_tree ,
OG_06_0000106 (SeedPlants) Phylogenetic Tree(s): OG_06_0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G07660
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
MA_74102g0010 No alias histone (H4) 0.03 Archaeplastida
Zm00001e007138_P001 No alias histone (H4) 0.04 Archaeplastida
Zm00001e027269_P001 No alias histone (H4) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Neighborhood
CC GO:0000931 gamma-tubulin large complex IEP Neighborhood
CC GO:0005635 nuclear envelope IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005828 kinetochore microtubule IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005876 spindle microtubule IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007052 mitotic spindle organization IEP Neighborhood
CC GO:0008274 gamma-tubulin ring complex IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
CC GO:0009574 preprophase band IEP Neighborhood
BP GO:0010154 fruit development IEP Neighborhood
BP GO:0040034 regulation of development, heterochronic IEP Neighborhood
CC GO:0044450 microtubule organizing center part IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048530 fruit morphogenesis IEP Neighborhood
BP GO:0051418 microtubule nucleation by microtubule organizing center IEP Neighborhood
CC GO:0072686 mitotic spindle IEP Neighborhood
BP GO:0080060 integument development IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Neighborhood
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!