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  5. Cpa|evm.model.tig00020710.93

Cpa|evm.model.tig00020710.93


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL28 component


Gene families : OG0003075 (Archaeplastida) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020710.93
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00210210 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AT2G19730 No alias Ribosomal L28e protein family 0.27 Archaeplastida
AT4G29410 No alias Ribosomal L28e protein family 0.29 Archaeplastida
Cre11.g467578 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
GSVIVT01016895001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
GSVIVT01035350001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Gb_38783 No alias component RPL28 of LSU proteome component 0.12 Archaeplastida
LOC_Os01g51020.1 No alias component RPL28 of LSU proteome component 0.02 Archaeplastida
LOC_Os02g57540.1 No alias component RPL28 of LSU proteome component 0.28 Archaeplastida
LOC_Os05g46430.1 No alias component RPL28 of LSU proteome component 0.2 Archaeplastida
MA_10428490g0010 No alias component RPL28 of LSU proteome component 0.11 Archaeplastida
Mp1g26940.1 No alias component RPL28 of LSU proteome component 0.27 Archaeplastida
Pp3c14_10480V3.1 No alias Ribosomal L28e protein family 0.33 Archaeplastida
Pp3c17_14060V3.1 No alias Ribosomal L28e protein family 0.28 Archaeplastida
Pp3c1_29070V3.1 No alias Ribosomal L28e protein family 0.15 Archaeplastida
Pp3c2_6100V3.1 No alias Ribosomal L28e protein family 0.18 Archaeplastida
Smo164298 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
Solyc03g121330.3.1 No alias component RPL28 of LSU proteome component 0.26 Archaeplastida
Solyc06g062500.4.1 No alias component RPL28 of LSU proteome component 0.15 Archaeplastida
Solyc12g044720.2.1 No alias component RPL28 of LSU proteome component 0.05 Archaeplastida
Zm00001e026410_P001 No alias component RPL28 of LSU proteome component 0.25 Archaeplastida
Zm00001e032283_P002 No alias component RPL28 of LSU proteome component 0.32 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029004 L28e/Mak16 5 121
No external refs found!