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  5. Cpa|evm.model.tig00020723.19

Cpa|evm.model.tig00020723.19


Description : Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase


Gene families : OG0002657 (Archaeplastida) Phylogenetic Tree(s): OG0002657_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020723.19
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007818001 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
GSVIVT01018097001 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
LOC_Os01g56670.1 No alias alpha-1,2 exomannosidase (MNL) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001382 Glyco_hydro_47 341 441
IPR001382 Glyco_hydro_47 79 204
IPR023801 His_deacetylse_dom 572 847
No external refs found!