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  5. AT1G80810

AT1G80810


Description : Tudor/PWWP/MBT superfamily protein


Gene families : OG0000410 (Archaeplastida) Phylogenetic Tree(s): OG0000410_tree ,
OG_05_0001049 (LandPlants) Phylogenetic Tree(s): OG_05_0001049_tree ,
OG_06_0000558 (SeedPlants) Phylogenetic Tree(s): OG_06_0000558_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G80810
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.96 No alias No description available 0.01 Archaeplastida
GSVIVT01002824001 No alias No description available 0.04 Archaeplastida
GSVIVT01035890001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.02 Archaeplastida
LOC_Os02g39920.1 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
MA_10127984g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g065710.3.1 No alias cohesin cofactor (PDS5) 0.04 Archaeplastida
Solyc11g012770.2.1 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
Zm00001e022962_P003 No alias cohesin cofactor (PDS5) 0.02 Archaeplastida
Zm00001e030989_P001 No alias cohesin cofactor (PDS5) 0.03 Archaeplastida
Zm00001e036853_P003 No alias cohesin cofactor (PDS5) 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0005652 nuclear lamina IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006513 protein monoubiquitination IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
CC GO:0008278 cohesin complex IEP Neighborhood
BP GO:0010390 histone monoubiquitination IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016363 nuclear matrix IEP Neighborhood
BP GO:0016574 histone ubiquitination IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033523 histone H2B ubiquitination IEP Neighborhood
CC GO:0034399 nuclear periphery IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!