Cpa|evm.model.tig00020848.29

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component

Gene families : OG0006076 (Archaeplastida) Phylogenetic Tree(s): OG0006076_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020848.29
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00050p00190920	evm_27.TU.AmTr_v1...	RNA biosynthesis.RNA polymerase II-dependent...	0.01	Archaeplastida
AT5G23080	TGH	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	0.02	Archaeplastida
GSVIVT01008206001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.02	Archaeplastida
Pp3c6_280V3.1	No alias	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein	0.02	Archaeplastida
Smo80512	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.01	Archaeplastida
Zm00001e036975_P003	No alias	component TOUGH of DCL1-HYL1 miRNA biogenesis complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011666	DUF1604	42	123
IPR000467	G_patch_dom	151	173

External Links

No external refs found!