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  5. Cpa|evm.model.tig00020848.60

Cpa|evm.model.tig00020848.60


Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3b component


Gene families : OG0003728 (Archaeplastida) Phylogenetic Tree(s): OG0003728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020848.60
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00268400 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.01 Archaeplastida
Cre03.g190100 No alias Protein biosynthesis.translation... 0.1 Archaeplastida
GSVIVT01036012001 No alias Protein biosynthesis.translation... 0.02 Archaeplastida
Gb_06841 No alias component eIF3b of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
LOC_Os10g41960.1 No alias component eIF3b of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida
MA_8572401g0010 No alias Eukaryotic translation initiation factor 3 subunit B... 0.01 Archaeplastida
MA_86963g0010 No alias Eukaryotic translation initiation factor 3 subunit B... 0.03 Archaeplastida
MA_86963g0020 No alias Eukaryotic translation initiation factor 3 subunit B... 0.02 Archaeplastida
MA_950659g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp8g14030.1 No alias component eIF3b of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
Pp3c11_25960V3.1 No alias eukaryotic translation initiation factor 3B-2 0.03 Archaeplastida
Pp3c7_370V3.1 No alias eukaryotic translation initiation factor 3B-2 0.02 Archaeplastida
Solyc01g088370.3.1 No alias component eIF3b of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
Zm00001e002405_P001 No alias component eIF3b of eIF3 mRNA-to-PIC binding complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013979 TIF_beta_prop-like 348 545
IPR000504 RRM_dom 43 98
No external refs found!