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  5. Cpa|evm.model.tig00020902.59

Cpa|evm.model.tig00020902.59


Description : Transcription initiation factor TFIID subunit 5 OS=Arabidopsis thaliana


Gene families : OG0001835 (Archaeplastida) Phylogenetic Tree(s): OG0001835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020902.59
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00026300 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
AMTR_s00103p00032160 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
AT3G49660 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Zm00001e005534_P002 No alias component WDR5 of COMPASS histone trimethylation complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 77 105
IPR001680 WD40_repeat 4 27
IPR001680 WD40_repeat 33 70
IPR001680 WD40_repeat 209 233
IPR001680 WD40_repeat 298 329
No external refs found!