Cpa|evm.model.tig00020903.17

Description : DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica

Gene families : OG0007523 (Archaeplastida) Phylogenetic Tree(s): OG0007523_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00020903.17
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AT2G47330	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Cre12.g522850	No alias	DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa...	0.01	Archaeplastida
GSVIVT01028137001	No alias	DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_12460	No alias	DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis...	0.02	Archaeplastida
Mp4g12240.1	No alias	DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis...	0.02	Archaeplastida
Pp3c2_16950V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Zm00001e001454_P001	No alias	DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa...	0.02	Archaeplastida
Zm00001e038325_P002	No alias	DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	484	580
IPR011545	DEAD/DEAH_box_helicase_dom	264	433

External Links

No external refs found!