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  5. Cpa|evm.model.tig00020903.33

Cpa|evm.model.tig00020903.33


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit


Gene families : OG0002594 (Archaeplastida) Phylogenetic Tree(s): OG0002594_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020903.33
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00013680 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
AT1G52360 No alias Coatomer, beta' subunit 0.02 Archaeplastida
AT1G79990 No alias structural molecules 0.06 Archaeplastida
AT3G15980 No alias Coatomer, beta' subunit 0.04 Archaeplastida
Cre02.g118500 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
GSVIVT01017121001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
Gb_26317 No alias subunit beta2 of coat protein complex 0.03 Archaeplastida
LOC_Os02g11830.2 No alias subunit beta2 of coat protein complex 0.03 Archaeplastida
LOC_Os02g11840.1 No alias subunit beta2 of coat protein complex 0.02 Archaeplastida
MA_10436968g0010 No alias peroxisomal polyamine oxidase (PAO2/3/4). subunit beta2... 0.02 Archaeplastida
Mp3g04060.1 No alias subunit beta2 of coat protein complex 0.06 Archaeplastida
Pp3c11_8520V3.1 No alias Coatomer, beta\ subunit 0.05 Archaeplastida
Pp3c14_8280V3.1 No alias Coatomer, beta\ subunit 0.03 Archaeplastida
Pp3c2_1810V3.1 No alias Coatomer, beta\ subunit 0.03 Archaeplastida
Solyc03g120270.4.1 No alias subunit beta2 of coat protein complex 0.05 Archaeplastida
Solyc06g066730.3.1 No alias subunit beta2 of coat protein complex 0.06 Archaeplastida
Solyc12g043000.3.1 No alias subunit beta2 of coat protein complex 0.06 Archaeplastida
Zm00001e014494_P001 No alias subunit beta2 of coat protein complex 0.07 Archaeplastida
Zm00001e024969_P001 No alias subunit beta2 of coat protein complex 0.08 Archaeplastida
Zm00001e030001_P002 No alias subunit beta2 of coat protein complex 0.05 Archaeplastida
Zm00001e037375_P002 No alias subunit beta2 of coat protein complex 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006692 Coatomer_WD-assoc_reg 301 416
IPR006692 Coatomer_WD-assoc_reg 418 712
IPR001680 WD40_repeat 90 127
IPR001680 WD40_repeat 177 215
IPR001680 WD40_repeat 133 171
IPR001680 WD40_repeat 59 85
IPR001680 WD40_repeat 15 43
No external refs found!