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  5. Cpa|evm.model.tig00020909.42

Cpa|evm.model.tig00020909.42


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component


Gene families : OG0001283 (Archaeplastida) Phylogenetic Tree(s): OG0001283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020909.42
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00107780 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
AMTR_s00061p00187310 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
AMTR_s00086p00164400 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
AT1G80750 No alias Ribosomal protein L30/L7 family protein 0.03 Archaeplastida
AT2G01250 No alias Ribosomal protein L30/L7 family protein 0.42 Archaeplastida
Cre12.g537800 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.33 Archaeplastida
GSVIVT01029288001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.34 Archaeplastida
GSVIVT01029655001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01034230001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Gb_20650 No alias component RPL7 of LSU proteome component 0.2 Archaeplastida
LOC_Os04g51630.1 No alias component RPL7 of LSU proteome component 0.26 Archaeplastida
LOC_Os08g13690.1 No alias component RPL7 of LSU proteome component 0.27 Archaeplastida
LOC_Os08g42920.1 No alias component RPL7 of LSU proteome component 0.03 Archaeplastida
MA_10428203g0010 No alias component RPL7 of LSU proteome component 0.09 Archaeplastida
MA_109845g0010 No alias component RPL7 of LSU proteome component 0.28 Archaeplastida
MA_47548g0010 No alias component RPL7 of LSU proteome component 0.19 Archaeplastida
Mp3g13040.1 No alias component RPL7 of LSU proteome component 0.42 Archaeplastida
Pp3c11_13640V3.1 No alias Ribosomal protein L30/L7 family protein 0.02 Archaeplastida
Pp3c1_37460V3.1 No alias Ribosomal protein L30/L7 family protein 0.27 Archaeplastida
Pp3c1_39470V3.1 No alias Ribosomal protein L30/L7 family protein 0.33 Archaeplastida
Pp3c2_1610V3.1 No alias Ribosomal protein L30/L7 family protein 0.18 Archaeplastida
Pp3c2_5820V3.1 No alias Ribosomal protein L30/L7 family protein 0.28 Archaeplastida
Smo103994 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Solyc06g068400.3.1 No alias component RPL7 of LSU proteome component 0.06 Archaeplastida
Solyc07g008370.4.1 No alias no hits & (original description: none) 0.27 Archaeplastida
Zm00001e003731_P002 No alias component RPL7 of LSU proteome component 0.02 Archaeplastida
Zm00001e007015_P002 No alias component RPL7 of LSU proteome component 0.29 Archaeplastida
Zm00001e022294_P001 No alias component RPL7 of LSU proteome component 0.38 Archaeplastida
Zm00001e024250_P001 No alias component RPL7 of LSU proteome component 0.01 Archaeplastida
Zm00001e040072_P002 No alias component RPL7 of LSU proteome component 0.13 Archaeplastida
Zm00001e041593_P001 No alias component RPL7 of LSU proteome component 0.34 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016082 Ribosomal_L30_ferredoxin-like 125 175
IPR012988 Ribosomal_L30_N 49 119
No external refs found!