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  5. AT2G02640

AT2G02640


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0001960 (Archaeplastida) Phylogenetic Tree(s): OG0001960_tree ,
OG_05_0001279 (LandPlants) Phylogenetic Tree(s): OG_05_0001279_tree ,
OG_06_0000662 (SeedPlants) Phylogenetic Tree(s): OG_06_0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G02640
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G29179 No alias BEST Arabidopsis thaliana protein match is:... 0.06 Archaeplastida
AT1G29180 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT1G44020 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT1G44050 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT1G53340 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT1G66440 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT2G13900 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT2G13950 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT2G28460 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida
AT3G50010 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT4G13130 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT4G15070 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT4G26380 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 Archaeplastida
AT5G02350 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 Archaeplastida
AT5G02360 No alias DC1 domain-containing protein 0.03 Archaeplastida
AT5G46670 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 Archaeplastida
AT5G48320 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
BP GO:0006266 DNA ligation IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR004146 DC1 266 313
IPR004146 DC1 348 395
IPR004146 DC1 461 504
IPR004146 DC1 513 562
IPR004146 DC1 404 451
IPR004146 DC1 212 256
No external refs found!