Cpa|evm.model.tig00020941.45


Description : Probable histidine kinase 3 OS=Oryza sativa subsp. indica


Gene families : OG0001200 (Archaeplastida) Phylogenetic Tree(s): OG0001200_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020941.45
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00205980 evm_27.TU.AmTr_v1... Two-component response regulator ORR41 OS=Oryza sativa... 0.04 Archaeplastida
AMTR_s00163p00022720 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT3G04280 RR22, ARR22 response regulator 22 0.01 Archaeplastida
GSVIVT01014514001 No alias No description available 0.01 Archaeplastida
Gb_27279 No alias Probable histidine kinase 5 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_27280 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g53100.1 No alias Two-component response regulator ORR41 OS=Oryza sativa... 0.01 Archaeplastida
Mp2g15100.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo162543 No alias Two-component response regulator ORR41 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e005629_P001 No alias Two-component response regulator ORR41 OS=Oryza sativa... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009584 detection of visible light IEA Interproscan
BP GO:0018298 protein-chromophore linkage IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003594 HATPase_C 1145 1259
IPR013515 Phytochrome_cen-reg 750 809
No external refs found!