AT2G02950 (PKS1)

Aliases : PKS1

Description : phytochrome kinase substrate 1

Gene families : OG0011492 (Archaeplastida) Phylogenetic Tree(s): OG0011492_tree ,
OG_05_0011380 (LandPlants) Phylogenetic Tree(s): OG_05_0011380_tree ,
OG_06_0011425 (SeedPlants) Phylogenetic Tree(s): OG_06_0011425_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G02950
Cluster	HCCA: Cluster_177

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01008021001	No alias	External stimuli response.light.UV-A/blue...	0.03	Archaeplastida
Solyc05g007480.1.1	No alias	phototropin signalling factor (PKS)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	NAS	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007602	phototransduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009581	detection of external stimulus	None	Extended
BP	GO:0009582	detection of abiotic stimulus	None	Extended
BP	GO:0009583	detection of light stimulus	None	Extended
BP	GO:0009585	red, far-red light phototransduction	IMP	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	None	Extended
BP	GO:0009637	response to blue light	RCA	Interproscan
BP	GO:0009638	phototropism	IGI	Interproscan
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009958	positive gravitropism	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	IMP	Interproscan
BP	GO:0010114	response to red light	IEP	Interproscan
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0010218	response to far red light	IEP	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046777	protein autophosphorylation	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1904062	regulation of cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000578	embryonic axis specification	IEP	Neighborhood
BP	GO:0001678	cellular glucose homeostasis	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0009672	auxin:proton symporter activity	IEP	Neighborhood
BP	GO:0009798	axis specification	IEP	Neighborhood
BP	GO:0009942	longitudinal axis specification	IEP	Neighborhood
BP	GO:0010044	response to aluminum ion	IEP	Neighborhood
BP	GO:0010143	cutin biosynthetic process	IEP	Neighborhood
MF	GO:0010329	auxin efflux transmembrane transporter activity	IEP	Neighborhood
BP	GO:0010411	xyloglucan metabolic process	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016615	malate dehydrogenase activity	IEP	Neighborhood
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Neighborhood
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Neighborhood
MF	GO:0016847	1-aminocyclopropane-1-carboxylate synthase activity	IEP	Neighborhood
BP	GO:0018904	ether metabolic process	IEP	Neighborhood
BP	GO:0033494	ferulate metabolic process	IEP	Neighborhood
BP	GO:0033500	carbohydrate homeostasis	IEP	Neighborhood
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	Neighborhood
MF	GO:0042285	xylosyltransferase activity	IEP	Neighborhood
BP	GO:0042593	glucose homeostasis	IEP	Neighborhood
MF	GO:0042802	identical protein binding	IEP	Neighborhood
MF	GO:0047560	3-dehydrosphinganine reductase activity	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	Neighborhood
BP	GO:0070887	cellular response to chemical stimulus	IEP	Neighborhood
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	Neighborhood
BP	GO:0071229	cellular response to acid chemical	IEP	Neighborhood
BP	GO:0071248	cellular response to metal ion	IEP	Neighborhood
BP	GO:0071281	cellular response to iron ion	IEP	Neighborhood
BP	GO:0071322	cellular response to carbohydrate stimulus	IEP	Neighborhood
BP	GO:0071326	cellular response to monosaccharide stimulus	IEP	Neighborhood
BP	GO:0071331	cellular response to hexose stimulus	IEP	Neighborhood
BP	GO:0071333	cellular response to glucose stimulus	IEP	Neighborhood
BP	GO:0071396	cellular response to lipid	IEP	Neighborhood
MF	GO:0080161	auxin transmembrane transporter activity	IEP	Neighborhood
BP	GO:0097306	cellular response to alcohol	IEP	Neighborhood
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G02950 (PKS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation