AT2G03160 (SK19, ASK19)

Aliases : SK19, ASK19

Description : SKP1-like 19

Gene families : OG0000418 (Archaeplastida) Phylogenetic Tree(s): OG0000418_tree ,
OG_05_0000338 (LandPlants) Phylogenetic Tree(s): OG_05_0000338_tree ,
OG_06_0013871 (SeedPlants) Phylogenetic Tree(s): OG_06_0013871_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G03160
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AT2G03190	ASK16, SK16	SKP1-like 16	0.04	Archaeplastida
AT2G20160	MEO, ASK17	E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein	0.04	Archaeplastida
AT2G25700	ASK3, SK3	SKP1-like 3	0.07	Archaeplastida
AT3G53060	SK6, ASK6	SKP1-like 6	0.04	Archaeplastida
AT3G60020	SK5, ASK5	SKP1-like 5	0.03	Archaeplastida
MA_10249530g0010	No alias	target protein binding component SKP1/ASK1 of...	0.02	Archaeplastida
MA_10316948g0010	No alias	target protein binding component SKP1/ASK1 of...	0.03	Archaeplastida
Solyc03g112710.1.1	No alias	target protein binding component SKP1/ASK1 of...	0.03	Archaeplastida
Zm00001e011287_P001	No alias	target protein binding component SKP1/ASK1 of...	0.03	Archaeplastida
Zm00001e011288_P001	No alias	target protein binding component SKP1/ASK1 of...	0.03	Archaeplastida
Zm00001e020534_P002	No alias	target protein binding component SKP1/ASK1 of...	0.03	Archaeplastida
Zm00001e042493_P001	No alias	target protein binding component SKP1/ASK1 of...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	Neighborhood
BP	GO:0002790	peptide secretion	IEP	Neighborhood
MF	GO:0004044	amidophosphoribosyltransferase activity	IEP	Neighborhood
BP	GO:0006144	purine nucleobase metabolic process	IEP	Neighborhood
BP	GO:0006863	purine nucleobase transport	IEP	Neighborhood
BP	GO:0009112	nucleobase metabolic process	IEP	Neighborhood
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0009306	protein secretion	IEP	Neighborhood
BP	GO:0015851	nucleobase transport	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
BP	GO:0046112	nucleobase biosynthetic process	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
MF	GO:0060089	molecular transducer activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	141	187
IPR016073	Skp1_comp_POZ	4	63

External Links

No external refs found!

AT2G03160 (SK19, ASK19)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation