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  5. Cpa|evm.model.tig00020961.20

Cpa|evm.model.tig00020961.20


Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana


Gene families : OG0002304 (Archaeplastida) Phylogenetic Tree(s): OG0002304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020961.20
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT4G00830 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 Archaeplastida
GSVIVT01033857001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.01 Archaeplastida
LOC_Os11g14430.2 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os12g04180.2 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.01 Archaeplastida
MA_10435174g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
Mp1g12580.1 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
Pp3c17_1210V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Solyc10g009220.3.1 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e021852_P001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e024082_P001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 206 268
IPR000504 RRM_dom 284 353
IPR000504 RRM_dom 127 196
No external refs found!