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  5. Cpa|evm.model.tig00020964.11

Cpa|evm.model.tig00020964.11


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.NOB1 endonuclease


Gene families : OG0004736 (Archaeplastida) Phylogenetic Tree(s): OG0004736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020964.11
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00064100 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 Archaeplastida
AT5G41190 No alias CONTAINS InterPro DOMAIN/s: Nin one binding (NOB1)... 0.01 Archaeplastida
Cre01.g031750 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
GSVIVT01019776001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 Archaeplastida
Gb_33378 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.01 Archaeplastida
LOC_Os02g02360.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 Archaeplastida
Mp1g16460.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 Archaeplastida
Pp3c2_34320V3.1 No alias No annotation 0.03 Archaeplastida
Solyc08g007990.3.1 No alias NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033411 Ribonuclease_PIN 10 96
IPR014881 NOB1_Zn-bd 291 361
No external refs found!