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  5. AT2G03610

AT2G03610


Description : F-box family protein


Gene families : OG0002951 (Archaeplastida) Phylogenetic Tree(s): OG0002951_tree ,
OG_05_0001985 (LandPlants) Phylogenetic Tree(s): OG_05_0001985_tree ,
OG_06_0001108 (SeedPlants) Phylogenetic Tree(s): OG_06_0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G03610
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G10110 No alias F-box family protein 0.04 Archaeplastida
AT2G04810 No alias Protein of unknown function (DUF295) 0.04 Archaeplastida
AT2G04830 No alias Protein of unknown function (DUF295) 0.04 Archaeplastida
AT2G05970 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 Archaeplastida
AT2G33200 No alias F-box family protein 0.04 Archaeplastida
AT3G03726 No alias Protein of unknown function (DUF295) 0.04 Archaeplastida
AT3G03730 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 Archaeplastida
AT3G22345 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 Archaeplastida
AT4G10820 No alias F-box family protein 0.05 Archaeplastida
AT4G12810 No alias F-box family protein 0.04 Archaeplastida
AT4G12820 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 Archaeplastida
AT4G14165 No alias F-box family protein-related 0.03 Archaeplastida
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 Archaeplastida
AT4G22660 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 Archaeplastida
AT5G14160 No alias F-box family protein 0.04 Archaeplastida
AT5G25290 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006312 mitotic recombination IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 21 60
IPR005174 DUF295 141 190
No external refs found!