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  5. Cpa|evm.model.tig00021017.6

Cpa|evm.model.tig00021017.6


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS19 component


Gene families : OG0002393 (Archaeplastida) Phylogenetic Tree(s): OG0002393_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021017.6
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207750 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
AMTR_s00110p00069670 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
AT3G02080 No alias Ribosomal protein S19e family protein 0.12 Archaeplastida
AT5G15520 No alias Ribosomal protein S19e family protein 0.08 Archaeplastida
AT5G61170 No alias Ribosomal protein S19e family protein 0.27 Archaeplastida
Cre02.g106600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 Archaeplastida
GSVIVT01007908001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01012199001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 Archaeplastida
Gb_40460 No alias component RPS19 of SSU proteome 0.13 Archaeplastida
LOC_Os03g31090.1 No alias component RPS19 of SSU proteome 0.25 Archaeplastida
MA_10427917g0010 No alias component RPS19 of SSU proteome 0.21 Archaeplastida
MA_7685779g0010 No alias component RPS19 of SSU proteome 0.03 Archaeplastida
MA_9301411g0010 No alias component RPS19 of SSU proteome 0.14 Archaeplastida
Mp1g27380.1 No alias component RPS19 of SSU proteome 0.25 Archaeplastida
Pp3c14_19640V3.1 No alias Ribosomal protein S19e family protein 0.2 Archaeplastida
Pp3c17_15200V3.1 No alias Ribosomal protein S19e family protein 0.13 Archaeplastida
Pp3c1_28780V3.1 No alias Ribosomal protein S19e family protein 0.21 Archaeplastida
Pp3c27_2780V3.1 No alias Ribosomal protein S19e family protein 0.05 Archaeplastida
Pp3c2_10060V3.1 No alias Ribosomal protein S19e family protein 0.24 Archaeplastida
Smo153225 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Solyc03g115360.3.1 No alias component RPS19 of SSU proteome 0.23 Archaeplastida
Solyc12g039120.2.1 No alias component RPS19 of SSU proteome 0.17 Archaeplastida
Zm00001e002011_P001 No alias component RPS19 of SSU proteome 0.19 Archaeplastida
Zm00001e038053_P003 No alias component RPS19 of SSU proteome 0.21 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 10 144
No external refs found!