Description : RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase

Gene families : OG0001869 (Archaeplastida) Phylogenetic Tree(s): OG0001869_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021073.40
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT5G14580 No alias polyribonucleotide nucleotidyltransferase, putative 0.02 Archaeplastida
Gb_20425 No alias polynucleotide phosphorylase (PNP) 0.02 Archaeplastida
MA_10432723g0020 No alias polynucleotide phosphorylase (PNP) 0.01 Archaeplastida
MA_10434926g0010 No alias Polyribonucleotide nucleotidyltransferase 2,... 0.01 Archaeplastida
Solyc02g086600.3.1 No alias polynucleotide phosphorylase (PNP) 0.03 Archaeplastida
Zm00001e015113_P001 No alias polynucleotide phosphorylase (PNP) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015848 PNPase_PH_RNA-bd_bac/org-type 296 356
IPR015847 ExoRNase_PH_dom2 180 243
IPR001247 ExoRNase_PH_dom1 359 492
IPR001247 ExoRNase_PH_dom1 48 176
No external refs found!