Cpa|evm.model.tig00021108.38


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021108.38
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00061p00110540 evm_27.TU.AmTr_v1... Transcription factor MYB80 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.01 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.02 Archaeplastida
AT2G31180 ATMYB14, MYB14, MYB14AT myb domain protein 14 0.03 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.01 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.01 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.01 Archaeplastida
AT5G23000 MYB37, RAX1, ATMYB37 myb domain protein 37 0.03 Archaeplastida
Cre02.g103450 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01027811001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01029941001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01030866001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_22927 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g42950.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g35390.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g45740.1 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_10431933g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_199974g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp1g24520.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.01 Archaeplastida
Mp3g23170.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp5g19050.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp7g16300.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Pp3c23_7530V3.1 No alias myb domain protein 77 0.02 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Smo75978 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo93784 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e020371_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 5 57
IPR001005 SANT/Myb 63 106
No external refs found!