1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021127.129

Cpa|evm.model.tig00021127.129


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021127.129
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00193260 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.02 Archaeplastida
AT2G24765 ATARL1, ARF3, ARL1 ADP-ribosylation factor 3 0.01 Archaeplastida
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.04 Archaeplastida
AT3G03120 ATARFB1C, ARFB1C ADP-ribosylation factor B1C 0.03 Archaeplastida
Cre12.g486250 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Cre12.g487850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01013765001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
GSVIVT01017654001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
GSVIVT01028179001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
GSVIVT01029113001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Gb_25641 No alias ARF-GTPase 0.02 Archaeplastida
LOC_Os03g59740.1 No alias ARF-GTPase 0.01 Archaeplastida
LOC_Os05g41060.1 No alias ARF-GTPase 0.02 Archaeplastida
LOC_Os07g12170.1 No alias ARF-GTPase 0.02 Archaeplastida
LOC_Os07g12200.1 No alias ARF-GTPase 0.02 Archaeplastida
LOC_Os08g15040.1 No alias ARF-GTPase 0.01 Archaeplastida
MA_167779g0010 No alias ADP-ribosylation factor 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_24477g0010 No alias ARF-GTPase 0.03 Archaeplastida
MA_7293641g0010 No alias ADP-ribosylation factor 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_92857g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g14560.1 No alias ARF-GTPase 0.01 Archaeplastida
Mp3g13920.1 No alias ARF-GTPase 0.01 Archaeplastida
Mp8g06130.1 No alias ARF-GTPase 0.05 Archaeplastida
Mp8g07320.1 No alias ARF-GTPase 0.02 Archaeplastida
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.04 Archaeplastida
Pp3c12_14940V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Pp3c12_9900V3.1 No alias ADP-ribosylation factor B1C 0.01 Archaeplastida
Pp3c4_20580V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Pp3c4_20623V3.1 No alias ADP-ribosylation factor A1E 0.02 Archaeplastida
Solyc01g008000.3.1 No alias ARF-GTPase 0.02 Archaeplastida
Solyc01g100860.3.1 No alias ARF-GTPase 0.07 Archaeplastida
Solyc01g100870.3.1 No alias ARF-GTPase 0.06 Archaeplastida
Solyc03g096910.3.1 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e011790_P001 No alias ARF-GTPase 0.06 Archaeplastida
Zm00001e019488_P002 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e021566_P001 No alias ARF-GTPase 0.02 Archaeplastida
Zm00001e033127_P003 No alias ARF-GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 7 176
No external refs found!