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  5. Cpa|evm.model.tig00021133.4

Cpa|evm.model.tig00021133.4


Description : RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-D2 component


Gene families : OG0003631 (Archaeplastida) Phylogenetic Tree(s): OG0003631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021133.4
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00221440 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 Archaeplastida
AT2G47640 No alias Small nuclear ribonucleoprotein family protein 0.02 Archaeplastida
AT3G62840 No alias Small nuclear ribonucleoprotein family protein 0.05 Archaeplastida
Cre10.g453450 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.11 Archaeplastida
GSVIVT01028015001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
LOC_Os05g24970.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.1 Archaeplastida
Mp3g10740.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.05 Archaeplastida
Pp3c10_17640V3.1 No alias Small nuclear ribonucleoprotein family protein 0.05 Archaeplastida
Pp3c12_17690V3.1 No alias Small nuclear ribonucleoprotein family protein 0.06 Archaeplastida
Solyc09g075130.3.1 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.02 Archaeplastida
Zm00001e007570_P002 No alias component Sm-D2 of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
Zm00001e041242_P002 No alias No annotation 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 31 102
No external refs found!