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  5. AT2G05630

AT2G05630 (ATG8D)


Aliases : ATG8D

Description : Ubiquitin-like superfamily protein


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0046549 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0041199 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G05630
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
Pp3c1_32190V3.1 No alias Ubiquitin-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006914 autophagy ISS Interproscan
MF GO:0008017 microtubule binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP Neighborhood
BP GO:0000162 tryptophan biosynthetic process IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000217 DNA secondary structure binding IEP Neighborhood
CC GO:0000228 nuclear chromosome IEP Neighborhood
BP GO:0000302 response to reactive oxygen species IEP Neighborhood
MF GO:0000400 four-way junction DNA binding IEP Neighborhood
BP GO:0000710 meiotic mismatch repair IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004004 ATP-dependent RNA helicase activity IEP Neighborhood
MF GO:0004067 asparaginase activity IEP Neighborhood
MF GO:0004106 chorismate mutase activity IEP Neighborhood
MF GO:0004371 glycerone kinase activity IEP Neighborhood
MF GO:0004462 lactoylglutathione lyase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005769 early endosome IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006290 pyrimidine dimer repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006446 regulation of translational initiation IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006516 glycoprotein catabolic process IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006530 asparagine catabolic process IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008186 RNA-dependent ATPase activity IEP Neighborhood
MF GO:0008780 acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009065 glutamine family amino acid catabolic process IEP Neighborhood
BP GO:0009068 aspartate family amino acid catabolic process IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009636 response to toxic substance IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009954 proximal/distal pattern formation IEP Neighborhood
CC GO:0010009 cytoplasmic side of endosome membrane IEP Neighborhood
BP GO:0016036 cellular response to phosphate starvation IEP Neighborhood
BP GO:0016093 polyprenol metabolic process IEP Neighborhood
BP GO:0016094 polyprenol biosynthetic process IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019348 dolichol metabolic process IEP Neighborhood
BP GO:0019374 galactolipid metabolic process IEP Neighborhood
BP GO:0019375 galactolipid biosynthetic process IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0019408 dolichol biosynthetic process IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
CC GO:0031371 ubiquitin conjugating enzyme complex IEP Neighborhood
CC GO:0031372 UBC13-MMS2 complex IEP Neighborhood
MF GO:0032135 DNA insertion or deletion binding IEP Neighborhood
MF GO:0032137 guanine/thymine mispair binding IEP Neighborhood
MF GO:0032138 single base insertion or deletion binding IEP Neighborhood
CC GO:0032300 mismatch repair complex IEP Neighborhood
CC GO:0032301 MutSalpha complex IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033345 asparagine catabolic process via L-aspartate IEP Neighborhood
MF GO:0033549 MAP kinase phosphatase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042542 response to hydrogen peroxide IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043405 regulation of MAP kinase activity IEP Neighborhood
BP GO:0043407 negative regulation of MAP kinase activity IEP Neighborhood
BP GO:0043408 regulation of MAPK cascade IEP Neighborhood
BP GO:0043409 negative regulation of MAPK cascade IEP Neighborhood
BP GO:0043570 maintenance of DNA repeat elements IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0045022 early endosome to late endosome transport IEP Neighborhood
BP GO:0045910 negative regulation of DNA recombination IEP Neighborhood
BP GO:0046219 indolalkylamine biosynthetic process IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098562 cytoplasmic side of membrane IEP Neighborhood
BP GO:0098927 vesicle-mediated transport between endosomal compartments IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
CC GO:1990391 DNA repair complex IEP Neighborhood
BP GO:2001289 lipid X metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!